Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838042.1_cds_XP_016506883.1_20067
CDS Infomation

[gene=LOC107824596] [db_xref=GeneID:107824596] [protein=transmembrane protein 87A-like] [protein_id=XP_016506883.1] [location=complement(join(42795..42960,43414..43550,44372..44467,45007..45925,46552..46757))] [gbkey=CDS]
Sequence

ATGCGGTGGTTGAAGTCAGCTGGAGCTTCAGGAGTAATCCTGCTGTGGTTATGTTTGTTC
CGTTTCACAGAAGCTTCAGTGCATGACTACAATGGGGAGAAATTCGTGAGCAAAGGCAAT
GCATTTGTTGTCCACGGCGGCAGCGAAGGAATTTACGCCTCTACTCCTAACTTCACTGAT
TCTCCTTCCTCTGACTCTTTCATTCGGTTTGAAAAGATTGTATTTCGGAGGCCAAAAGAA
TTGTCAAACTTTAGTTCAGACCCAATTCATGCAATTGTTTTTGAGGTCGATGATCGAGAG
TCAATTGGGGGCTCAGCCTACGGTGGCCAAAGAGCTGTTTGTTGCACAGCAGATCTTGCA
AAACTTGGAGTTTGTACACAAGGGCAAATTATTTACCGCCCATCTGCTAATAATCTCGGA
TGGCCTAAAGTTTTTAGTGCCTCATTCAGCACTGATGAGGTTGAAGTAGCACTGCAGTCA
AGATCGGTCCCCATTACAAAAACTGGGATGTATAATGTGTATTTTATTCACTGTGAACCA
TATCTTAAGGATATTACTGTTGAAGGGAAAACCATATGGAAGAATCCTACTGGTTACCTA
CCTGGTAGAATGGCCCCCCTTATGAACTTCTATGGTTTCATGTCTCTTGCATTCGTGTTA
CTTGGGATCTTTTGGTTTTCGCAGTATGCAAGATTCTGGAGAGAAGTTATTCCTCTACAA
AATTGTATTACACTCGTGATAACATTGGGCATGCTTGAAATGGCCTTTTGGTACTTTGAC
TATGCTGAATTCAATGAAACTGGAGTCAGGCCCACTGGTACCACTGTATGGGCTGTGACC
TTTGGTACAGTAAAGCGCACAGTTTCACGTTTGGTCATTCTGATGGTCTCTATGGGCTTT
GGTGTCGTTAGACCTACTTTAGGTGGTCTCACATCGAAGGTCCTTTTGCTTGGAGGAACT
TTCTTTTTGGCTTCTGAAGTGCTTGAACTGGTAGAAAATGTTGGTGCAGTCAGTGATTTC
TCAGGAAAAGCAAGGATATTTTTCGTACTTCCTGTGGCATTCTTGGATGCTTTCTTTATC
CTTTGGATATTCACCTCCCTGTCAGCAACTTTGAATAAGCTTCAGGCTAGAAGGTTGTTG
GCCAAATTAGACATTTACCGGAAGTTCACAAATGCATTGGTCGTCGCTGTTATTGTATCT
GTTGGATGGACGTGCTACGAGCTATACTTCAAGTCCACTGATGTGTACAATGAGCGATGG
CAAAATGCCTGGATTATTCCTGCCTTCTGGCAAGTGCTATCTTTCTCTCTCCTTTGCATA
ATCTGCGCTCTTTGGGCACCATCTCAAAACTCCATGAGATATGCCTACTCCGATGATGGG
GAAGAGTTCGACAAGGACGTTACATTGACGCTCATAAAGCCCTCCCCTCTGCCAAAGGAT
GTCAGAAGCCAACCTGAAGTGAGGCCAACACTGGGTAACGATGGGTTACCTGATGGTGAT
GAGGTAGAAGACAAGACAGAGTAA

Peptide Sequence

PEP ID

XP_016506883.1
PEP Infomation

PREDICTED: transmembrane protein 87A-like [Nicotiana tabacum]
Sequence

MRWLKSAGASGVILLWLCLFRFTEASVHDYNGEKFVSKGNAFVVHGGSEGIYASTPNFTD
SPSSDSFIRFEKIVFRRPKELSNFSSDPIHAIVFEVDDRESIGGSAYGGQRAVCCTADLA
KLGVCTQGQIIYRPSANNLGWPKVFSASFSTDEVEVALQSRSVPITKTGMYNVYFIHCEP
YLKDITVEGKTIWKNPTGYLPGRMAPLMNFYGFMSLAFVLLGIFWFSQYARFWREVIPLQ
NCITLVITLGMLEMAFWYFDYAEFNETGVRPTGTTVWAVTFGTVKRTVSRLVILMVSMGF
GVVRPTLGGLTSKVLLLGGTFFLASEVLELVENVGAVSDFSGKARIFFVLPVAFLDAFFI
LWIFTSLSATLNKLQARRLLAKLDIYRKFTNALVVAVIVSVGWTCYELYFKSTDVYNERW
QNAWIIPAFWQVLSFSLLCIICALWAPSQNSMRYAYSDDGEEFDKDVTLTLIKPSPLPKD
VRSQPEVRPTLGNDGLPDGDEVEDKTE

Transcript Sequence

Gene sequence data has not been registered.